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… [postdoc advisor] Brad Moore – who we talked to in, what, episode five – that’s one of his things was for a long time … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … to hear more science from her, check out her podcast Genome Insider. She talks to lots of great scientists outside of …

… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … be working out, so expect lots more to come. Maybe a bonus episode soon, too. Thanks for listening! And enjoy this … So we’ll run things in like little Eppendorf tubes, or in 96, or 384 well plates. But then the fun really starts when …

… % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 175 152.100 87% 2,117 … the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 unique* JGI … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …

… for uncultivated phages.  Current Opinion in Virology .  49 , 117-126 Berg, M. and Roux, S. (2021) Extreme dimensions … as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …

… by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … datasets to further gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated … Science   355(6322):294-298 Paez-Espino D. et al. (2017) IMG/VR: a database of cultured and uncultured DNA Viruses …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 … in synthetic biology engineering workflows. … The IMG/M system serves as a community resource for comparative …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized … Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of …

… “Adopt a Genome” is an informal program for faculty to “claim” the … biological insights from sequence data, employing IMG data and tools for comparative analysis, visualization … entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and …

Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the soil. Penn State researchers Mary Ann Bruns and Terry Bell …

… addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … directly isolated from environmental samples.  … The IMG/M system serves as a community resource for comparative …