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… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … be working out, so expect lots more to come. Maybe a bonus episode soon, too. Thanks for listening! And enjoy this … So we’ll run things in like little Eppendorf tubes, or in 96, or 384 well plates. But then the fun really starts when …

… by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … datasets to further gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative …

Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the soil. Penn State researchers Mary Ann Bruns and Terry Bell …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and …

… addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

… for uncultivated phages.  Current Opinion in Virology .  49 , 117-126 Berg, M. and Roux, S. (2021) Extreme dimensions … as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica …

… … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during simulated range shifts of … advanced bioenergy crops … Characterization of simplified soil communities with high and low carbon use efficiency …

… (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … interactions through global metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits of … mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature Communications. 9 (1), 1-9 Schulz …

… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …