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… exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … so we just talked to Aaron Puri [coming up in a future episode!] and we were talking about signaling molecules. And … what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …

Can plants help humans attain a renewable energy future? Can they help lock away more carbon? Xiaohan Yang, a scientist at Oak Ridge National Laboratory, believes …

Actual Total Actual % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 … target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …

… and contribute to a healthier planet and a thriving future. … The Plant Program advances our understanding of … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … The pangenomes enable the exploration and identification of small and large structural variation — this variation drives …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized … for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … metabolomics with genomic data to gain insights into how small molecules function within plants, microbes, and …

… factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … line of communication to the scientific community. In each episode, hear from luminaries in the field about current and future developments, and how the JGI can be part of that …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological … resistance. Cell . 184(13):3376-3393 Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … . Microbiology Resource Announcements. 2023 12 (10), e00548-23 Whole genome sequence of the denitrifying thermophile …

… improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF projects . One of them supports a project between … technology called chassis-independent recombinase-assisted genome engineering (CRAGE), which offers single-step genomic …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to …

… (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … Nature Reviews Microbiology 20 (5), 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits …