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… exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … so we just talked to Aaron Puri [coming up in a future episode!] and we were talking about signaling molecules. And … what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …

… Can plants help humans attain a renewable energy future? Can they help lock away more carbon? Xiaohan Yang, a scientist at Oak Ridge National Laboratory, believes …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …

…   Actual Total   Actual % Goal   FY 2026 Total   700.0     8,585     Q1 2026 175 313.081 179% 2,208 2,064 95.4% Q2 2026 … target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …

… and contribute to a healthier planet and a thriving future. … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … Plant Flagship Genomes are selected through discussion with the JGI Plant … The pangenomes enable the exploration and identification of small and large structural variation — this variation drives …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological … 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … metabolomics with genomic data to gain insights into how small molecules function within plants, microbes, and …

… realized under standard laboratory conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … line of communication to the scientific community. In each episode, hear from luminaries in the field about current and …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … filter, cluster, annotate, and bin viruses from metagenomes. mSystems 9:e00888-24. https://doi.org/10.1128/msystems.00888-24 Coclet, …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing of …

… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … for comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …