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… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … been working on that we sequenced the genome. And it has 17 resistant genes on a plasmid that’s actually– it’s pretty …

… outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … so we just talked to Aaron Puri [coming up in a future episode!] and we were talking about signaling molecules. And …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties …

… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us genome miners get really jazzed about finding enzymes that … be working out, so expect lots more to come. Maybe a bonus episode soon, too. Thanks for listening! And enjoy this …

… Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …

… two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered surprises, adopted …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … systems can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   …

… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. …

… Description Deliverables Cycle Time FY25 Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

… Novel archaeal lineage found in Yellowstone may have been important in early Earth … applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …

… Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …