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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … call is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as … technology called chassis-independent recombinase-assisted genome engineering (CRAGE), which offers single-step genomic …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … Institute. And that was lovely. Because they really saw the potential. We started showing them molecules that would … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome …
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Natural Prodcast Episode 16: Marcy Balunas
Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … chemistry that deals with reactive oxygen species and so potentially could go down that route.  DAN: So the sun … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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Natural Prodcast Episode 14: Nigel Mouncey
… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … products work, right? Think about how many things that are potential drug molecules that have micromolar activities. … it’s really about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that …  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role small …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities … support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, … and assembling physical DNA constructs that can then be functionally characterized.    We provide custom DNA …
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