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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I … that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by …
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Natural Prodcast Episode 19: Bill Fenical
… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real … for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial … and Initiatives … Microbial Program Head … Resources and Tools …
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Natural Prodcast Episode 8: Eric Schmidt
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … a very personal connection to. And we have one more speaker today who I have a very personal connection to. So our … learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … audience. Send me those mean tweets and emails. But anyway, today, please enjoy this great conversation with my good … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … (SIMB) Natural Products meeting earlier this year. And today we have our conversation with Professor Alison … I’m so excited about my lab’s robot is that it gives us a tool to help us– DAN UDWARY: You can generate that data. …
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … And it looked really challenging. And, you know, here I am today. So I guess I didn’t listen to myself, did I? I think … us is connecting genes to chemistry to really expand the toolbox of biocatalysts that we work with. Seemed like …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … our little section on international genome miners, and today we have Francisco Barona-Goméz, or Paco, as he prefers … the Nature Chemical Biology — or early this year– this new tool that we call CORASON, which is basically an acronym to …
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GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes
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CSP New Investigator Call
… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   … assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence …
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An Automated Tool for Assessing Virus Data Quality
Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … to this point, there has been a lack of fast and accurate tools for researchers to assess the quality of … Laboratory (Berkeley Lab), has developed a command-line tool called CheckV that can automatically do both. The work …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, …
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