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Plant Program
… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … compounds.  The program is working to expand genomic resources for key plant species, enhancing our understanding … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 23: Aaron Puri
… briefly when you were looking at these genomes for the first time getting excited about this. And so you find these … trying to do in our independent lab now is use these as a resource for natural product discovery because we can … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Natural Prodcast Episode 15: Katherine Duncan
Super. Alison Takemura: All right, I want to ask the first question. Kate, can you tell me the story of how you … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … to ActinoBase.org . It’s a fantastic community-built resource for experimental protocols, media recipes, plasmid …
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Single Cell Research Group
… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … cultivated representatives. The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which … strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to only three phyla. …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s Data Policy . … Photon Source Capabilities for FICUS Research describes the resources available from all the facilities participating in …
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Natural Prodcast Episode 18: A CSP Primer
… we cover. OK. Long intro today. We’ll have two discussions. First up is Tanja Woyke , JGI’s Deputy of User Programs.   … budget to get these samples. Do they have expertise and resources to extract the nucleic acids or collect the cell … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to …
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Frequently Asked Questions: Project Management
… can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … date, the project manager may then schedule and allocate resources for DNA sequencing. … No. However, the JGI does … on the Genome Portal . … You can view the status of all public projects on the JGI Genome Portal . The PI and all …
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Natural Prodcast Episode 7: Ben Shen
Prodcast. It’s been about a month now since we dropped our first six episodes, and now after gathering some feedback … notes, and I’ll put up some structures and link to some resources you can use to get caught up, if you’re not … basically – so the drug discovery you can – to the general public, there’s two major – if I have to think about a …
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Natural Prodcast Episode 17: Cassandra Quave
… really it was my third grade science fair project where I first looked into a microscope and just fell in love with … into force in 2014. There’s now a website that has a lot of resources that you can access. As an ethnobotanist, a lot of … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Microbial Program
… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … samples.  … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes from three domains of life. It …
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Fungal & Algal Program
… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … solutions, fostering a bioeconomy powered by nature’s resources. … The Fungal & Algal Program harnesses … is a comprehensive resource hub that provides access to publicly available sequenced algal genomes and genome …
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