Search

… experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this tripartite plant-bacterial-phage model system. We seek to expand beyond this model system by identifying phages and characterizing this …

I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … consortia of microorganisms growing on the walls. They look like– they look like colonies, different colors, all sorts of different …

… and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … sequencing scores of microbial species as well as several model organisms and contributing this information freely to … patterns in large complex data, building predictive models for the behaviors and interactions of complex …

Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a genome miner and has been involved with the … welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … different standpoint or from very different angles, right? Like, the big question is that there are all these molecules …

… diversity and metabolic potential, with implications for energy production, environmental sustainability, and … metagenomic data with detailed characterization of model systems to explore the dynamics of microbial … analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These …

… be coming out on the first Thursday of the month, just like I promised. Now I just have to make this whole “on-time … not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … to actually get to that product. And-- DAN: So, this is like real synthetic chemistry-- BETSY PARKINSON: Yes. DAN: …

Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by … and other chemicals. Summary Filamentous fungi are like handymen who show up at a job site for a task that … a proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, …

… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … of uncultivated lineages is of high value to establish models and hypotheses, experimental data is critical to …

All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … the applicant/community, and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics … are of relevance to bioenergy-related feedstock crops or model plants. Projects targeting marine systems must clearly …

… fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. … finally resorting to explosives to succeed. Altiarchaea, like the Hornburg, have a history of countering multiple … to virus infections, researchers are using Altiarchaea as a model system to study virus-host interactions. Approximately …

… to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development … in enabling systems biology analyses, such as metabolic modeling, that go well beyond genome annotation and … and individual genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are designated DOE …