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… with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … what are you going to do. So, you probably know that “DOE” is the United States Department of Energy, which is a … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating …

… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a …

… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, science … in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often …

… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input …

… , a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …

… The JGI has diverse capabilities in: DNA and RNA sequencing, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … for a proposal, we encourage you to contact the relevant JGI  Science Program leads to discuss available options. …

… up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters … scientists to drive innovations that align with DOE's missions. …

… was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … outside my yard or so. Also, what we wanted to look at is, does it make a difference if I go today and tomorrow? Can I … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

… The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online … (WIP) interface.    For commonly asked questions about JGI’s proposal calls and proposal submission, as well as … The “User” signing the JGI User Agreement will be an authorized representative from …

… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Alison is no longer with us… She’s alive! She just doesn’t work for JGI anymore! [LAUGHTER] AARON PURI: Yeah. … DAN: Almost like you know that there is. AARON PURI: It’s a planted question Dan. Yeah. So overall I think what we’re …

… go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … countries (Iran, North Korea, Cuba, and Syria), need DOE permission and authorization from other U.S. government … or longer to obtain with no guarantee of approval.    JGI staff are not eligible to submit proposals, or to be …