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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … genome mining is, if I want to explain that to someone who doesn’t know much about genetics or anything else, science …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … What is beautiful for natural products is nature! Nature does this sort of – if you think of nature as a scientist, …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome … describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … all over the world in the next couple of years. DAN: What does it take to become a hub? MARC: We’re still trying to …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and …
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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … request a JGI Single Sign On account at https://signon.jgi.doe.gov . This account can then be used to submit proposals, …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … metabolite peptides. And there are two ways that nature does this. The more well-known secondary metabolism systems … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have …
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