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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … check it out. You can get more info at usermeeting.jgi.doe.gov . And I’ll be sure I put that link in the show … Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve done since that first …
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Partnerships Development Team
… was established in part to help better-connect industry to JGI resources, as well as target academic, governmental and … can retain rights to their own inventions and have the first right to license Lab inventions generated through the … Office (IPO) and read the Guide to Partnering with DOE’s National Laboratories . … Recent Partnerships … The …
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Natural Prodcast Episode 15: Katherine Duncan
Super. Alison Takemura: All right, I want to ask the first question. Kate, can you tell me the story of how you … has been really, really fun. Alison Takemura: And then does that also– well, I guess the question really is, do … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …
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Natural Prodcast Episode 7: Ben Shen
Prodcast. It’s been about a month now since we dropped our first six episodes, and now after gathering some feedback … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … What is beautiful for natural products is nature! Nature does this sort of – if you think of nature as a scientist, …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … scientists to drive innovations that align with DOE's missions. … The DNA Synthesis Program plays a central … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …
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Natural Prodcast Episode 2: The Primer, Part 2
… if you ended up here somehow without having listened to the first part, you might be a little lost, and I’d suggest you … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … to your cell wall, then the antibiotic, you know, doesn’t affect it anymore. And so all of those antibiotics …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Alison is no longer with us… She’s alive! She just doesn’t work for JGI anymore! [LAUGHTER] AARON PURI: Yeah. … tundripaludum is my favorite and is again, maybe highlighting the people-centric aspects of the broader field …
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … data scientist Alan Kuo at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Natural Prodcast Episode 3: The Primer, Part 3
… episodes. This IS the third part, so if this is the first episode you’re checking out, you probably want to go … state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … we recognize and sticking another piece in, that usually doesn’t work, or if it does work, it doesn’t work as well, …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …
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