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… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … and InterProScan. And all of those have ended up in the SMC database. There’s a web front end for it, and it’s just a …

… the direction of programs and initatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …

… was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … of searching the internet, searching literature, and making databases. Because that’s what I noticed is really a … outside my yard or so. Also, what we wanted to look at is, does it make a difference if I go today and tomorrow? Can I …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … of data to support their use by those generating data. The JGI Data Policy applies to research data and analysis …

… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … of the journal in which the research is published. The JGI expects that the data produced by the facility result in … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as …

… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction … Tips for High Molecular Weight DNA extraction: …

… Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. Users conduct experiments in … the required capabilities, they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for … Click for a list of CMMs and the results of the 2023 DOE Critical Materials Assessment . While we expect most …

… JGI Mission As a U.S. Department of Energy Office of Science … challenges in resource resilience and economic growth. The DOE, through its BER program, plays a central role in … drive biotechnology and biomanufacturing innovation. The JGI contributes to this mission by enabling large-scale …

… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the … methods for converting digital information from sequence databases into biotechnological or environmental …

… efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …

… The JGI is leveraging its current partnerships to offer new … Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank … way. We also work with our partners to ensure platforms are future-ready for advancements enabled by …

… with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … what are you going to do. So, you probably know that “DOE” is the United States Department of Energy, which is a … in addition to sequencing, we offer metabolomics and also DNA synthesis. And we consider these capabilities a little …