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… understanding of plant diversity and integrating various data types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene … health. By integrating cutting-edge technologies and data-driven methods, the program equips researchers …

… of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly …

Our data platforms are a key resource for the broader scientific … unified access to all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI … and their associated metadata, around the world. … The IMG/M system serves as a community resource for comparative …

… the idea of taking all the different natural products data that there is and putting things, coalescing them, so … basic questions that we can only really address with bigger data sets and integrated data sets. So yeah, in terms of, I … that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by …

… technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from … — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics Officer. JGI’s Portals, including Phytozome , IMG , GOLD , MycoCosm , and PhycoCosm , serve researchers …

Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data functionality. Close …

… did those sequences go? Like, what are the other scientific tools we offer people? TANJA WOYKE: Yeah. Also a really good … algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in terms of the … is over, the data gets released on our portals, such as IMGM. But we also then push the data to GenBank. So the raw …

CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic …

… by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and … characterization methods, in addition to bioinformatics tools to elucidate phage function in this tripartite … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the …

… now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the … little vague to me. What do you mean by putting a bunch of tools in one package? DAN UDWARY: Oh, sure. So if I wanted … of Biosynthetic Clusters , which is a subsection of the IMG data portal , which is a larger portal for microbial …

… train students and professors in laboratory techniques and data analyses compile original data for improving fungal genomic resources empower students … comparative analysis.  MycoCosm provides data and tools via a graphical user interface, ensuring that no …