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… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …

… prefers to be known among friends in natural products. He’s from Langebio in Irapuato, Mexico, and an incredibly bright … of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature …

… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I … our interview this week is with Professor Brian Bachmann from Vanderbilt University’s Chemistry Department, where he … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …

… call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE … focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range …

… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … on integrating database mining and sequence design with scaling the production of large, difficult to synthesize … on developing methods for converting digital information from sequence databases into biotechnological or …

… DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … collaboration with U.S. and international scientists to drive innovations that align with DOE's missions. … over 70 projects, including gene synthesis, combinatorial pathway design, and efforts to refactor entire …

… of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science …

… Laboratory. Being a User Facility means that scientists from all over the world bring us big problems related to … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … or microbial population, you have some set of shared traits that everyone has but there’s still variability. …

… you’ll be hearing about microbiology and natural products from the Great Salt Lake, and you’re going to learn, like … has been doing work in secondary metabolism. The very first CSP I ever worked on back in Brad’s lab, we talked about it … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …

… that there wasn’t enough application there. And so I moved from there to plant natural products, getting a PhD in … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …

… Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … the University of Hawaii and moved there in the early ’60s from Berkeley to work on this new budding field of marine … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …

… we get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is … and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …