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… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …

… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and deliverables as well as target cycle … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome …

… for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal submission … Access to the Molecular Foundry and use of JGI capabilities is free. The JGI supports remote users. …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …

… The United States  is the world’s leading soybean producer , and soybeans are used to produce … causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … (form symbiotic relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 … the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems …

… The soybean is a crop that could boost biofuels and fertilize … about that work from researchers Gary Stacey (University of Missouri), Peter van Esse (The Sainsbury Laboratory) and …

… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … staff to onboard users and guide them through the process of working with our facility. This includes help with: … Please review our FAQ in advance of contacting the PMO office.  …

… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …

… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … from that decay, and deliver those nutrients to tree roots and soil. These fungi help shape a forest’s ecology. … said, the 1000 Fungal Genomes project, together with other CSP projects, had sequenced over 2,000 fungal genomes. The …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science …