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… initial work was very labor intensive. But it gave us a basal training set we could use to build more sophisticated … it was worth putting that time into. ALISON: What was the role of potential collaborators? Like, what did you pitch to … to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural …
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… natural products for agriculture, and his upcoming new role as the Society for Industrial Microbiology and … our work in sequencing and genome mining with using DNA synthesis to express clusters metabolomics to be able to … NIGEL MOUNCEY: Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary …
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… functional genome annotation, improves understanding of the role small molecules play in diverse biological systems, … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …
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… marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your … them. They’re filter feeders that have a really important role on the reef and other environments. And you can find … and so on that we can consult in designing pieces of DNA that we can use to test these issues. The second area …
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… pathways, which led her to a successfully funded JGI CSP project. And we also got to talk about work at her … as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain sequences of DNA, … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …
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… to the user and no granting of funds. Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING …
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Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s … Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw from the …
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… has been doing work in secondary metabolism. The very first CSP I ever worked on back in Brad’s lab, we talked about it … or whatever you’d like, whatever D– you can submit any DNA sequence really, and it will go through SMC’s pipeline. … association with the potential like, what’s the ecological role? So there’s a lot there that the databases don’t have. …
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… then doesn’t become your parent anymore, but has this other role in your life. A colleague, ya know, a teacher in many … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some … a little bit more difficult. And so getting out clean DNA can also be a challenge there too. So JGI we really have …
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… The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and computational … of University and Research; all specimens collected and fungi isolated are preserved in the Culture Collection of … United States is one of the world’s largest consumers of petroleum, most of which is used for transportation and …
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… below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as … well as in advanced assembly and engineering strategies for DNA synthesis applications. If JGI personnel contribute … by agreement with the collaborator, JGI staff take a lead role in the analysis, planning, writing, and editing of the …
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… of their synthases so that we can start to use the DNA sequence to predict or just understand better the …
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