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… over our interview with Dr Elizabeth (or Betsy) Parkinson from Purdue University. She’s in the Department of Chemistry … with known receptors, but we also have ones that are completely their own cluster. And so we're hypothesizing … in is actually seeing whether we could go into the genomes and predict what the natural product might actually …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in … Nayfach S, et al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature …

… we get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is still pretty young, but he’s been dead center and a lot of … and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get …

Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a … yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … why we had the idea that the microviridins also could be completely different compounds. But that got at the idea …

DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … for bioenergy and bioproduct applications. The program has completed over 70 projects, including gene synthesis, … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … novelties and expansions.  … The SMC provides complete sequence and annotation data for secondary …

… real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill … know, I’m here to find a job. I would like to do something completely new. And that is to begin to study the organic … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …

… in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] … the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … something like soil, which I’m working on now, this is a complete black box, we’re talking many, many orders of …

… agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton … and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant … high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. …

Proposals accepted before FY22 are transitioning away from producing use-restricted data. JGI proposals typically … based on scientific need. Proposals are considered complete when all agreed-upon projects are complete. This … to the 2-year use-restriction policy as described here. No single project has data under both use-restriction and …

… is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of … DOIs following the guidelines below.  … If you use data from 3 or fewer JGI proposals, include those DOIs in the auspice statement where indicated. If you use data from 4 or more proposals, include those DOIs in a data …