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… product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I was working on chemically … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … and other-- DAN: True. BETSY PARKINSON: --aspects of the life cycle, but we're just particularly interested in their …

Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … of organics will not be considered. Projects targeting marine systems must clearly demonstrate relevance and … BER’s energy and environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities …

… has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … of all publicly available genomes from three domains of life, in a uniquely integrated context.  … The MycoCosm web …

Novel approaches are being explored to predict microbial lifestyles using AI-driven analysis of such datasets. The … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … associated with the chemistry department as well as the life sciences department. So welcome, Alison to today’s … using ancestral sequence reconstruction”,  PNAS.  2023,  120, e2218248120. doi : 10.1073/pnas.2218248120 …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … then got funded to work for two years at the Max Planck for marine microbiology in Bremen, Germany. And I wanted to work … that I was exchanging with people. So I think I wrote 3,000 emails in the course of one and a half year while …

Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating these … areas that are less of a focus, I would say. For example, marine research is not so much of a focus within BER …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … there. This is Dan again, and you’re about to listen to the 3rd and final part of Natural Prodcast’s “Primer” episodes. … we talked about sponges, go pull a sponge or extract some tree bark. And so you’re just taking something, you’re …

… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … all major evolutionary lineages in the land plant tree of life.   As of the start of 2022, there were 120 principal …

… as well as a unique opportunity to complete a California K-12 science or math teaching credential as an undergraduate …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … larger eukaryotic microbes!” It’s one of my missions in life to get people to think more about fungi.    ALISON: … together. So this is really just an effort to close those gaps. And I’m just one of many people where we provided DNA. …

… support through the JGI (with the exception of DE-FOA-0003453, which is eligible for BERSS). Available Resources All JGI … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …