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… for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe they don’t have available in their labs, … wider natural products community about what they need to advance their science, and what JGI can do to help that. So … go look that up and I couldn’t find the answer, so it’s not known as far as I could tell.  ALISON: It could be bacterial …

… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing state-of-the-art … Development and maintenance of the Integrated Microbial Genomes (IMG) data management system … As part of this …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and skills …

… users have access to cutting-edge capabilities to help advance their science by generating data in three …

… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological …

… chemical biology, a lot of which people classify as tool building. So I worked with a really great guy named Matt … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … forms which is the form that uses these compounds that are known as acyl homoserine lactones. So again, podcast format …

Biology is currently experiencing a revolution brought on by … data, coupled with recent computational technology advances in management, processing and visualization of “big … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science …

… have Francisco Barona-Goméz, or Paco, as he prefers to be known among friends in natural products. He’s from Langebio … for a long time about the evolution and natural products systems. This conversation came about because he challenged … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature …

… small town. We didn’t have AP or IB courses or any of these advanced things that my kids have opportunities to partake … I put a lot of emphasis in my program on research capacity building. And I think this is something I’d love more … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … obligate marine. There’s so far no species or no strains known that really grow in freshwater. But they’re actually … protein or the genes that you are analyzing. And then we’re building phylogenies a lot, making phylogenetic trees, and …

… by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of … exploring  Escherichia coli and  Streptomyces lysate systems. Deciphering regulatory networks of secondary … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time – we worked together on Aflatoxin … high altitude! And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more … It was in pieces. And so one of the things that’s really advanced us over the last few years is, everyone in the …