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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … that will help solve energy and environmental challenges. Switchgrass is a native, shrubby grass that can grow … and environments. The long-term investments in both the genomics and gardens are helping these shrubby grasses …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … none of that is going to change. It’s only just– we’re just building onto it. So the site is usable now. The website is …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … biodiversity over the past 80 years! DAN: Maybe! How much variation in that collection do you think there was? BEN: So …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really … BACHMANN: Everything starts with genome mining. And a great database. DAN UDWARY: All right, awesome. So you have a …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary metabolites. …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass … long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … constraints exerted by viruses. Research in the viral genomics group aims at improving our collective …
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … that’s just incredible to think about. And then, from an genomic point of view, I mean, I don’t need to say to you, … gene clusters of those.And they’re just like nothing in databases that currently exist. We looked at chemistry, so …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential …   355(6322):294-298 Paez-Espino D. et al. (2017) IMG/VR: a database of cultured and uncultured DNA Viruses and …
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