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… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … discovery. It’s also the kind of book we can hand off to family members and friends as a way to introduce them to the … Usually when we do these interviews, most of the people that I think we’ve talked to so far I either know …

… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … goodness. I mean, if you were to find my scientific papers, that would be Katherine. Dan Udwary: Right. Kate Duncan: But … She talks to lots of great scientists outside of secondary metabolism, and if you like what we’re doing here, you’ll …

… DAN: Welcome back for episode 9 of Natural Prodcast. This … SIMB, or the Society for Industrial Microbiology conference that took place in January this year in San Diego, and that … hypotheses, about the relationship between a compound or family of compounds and corresponding gene cluster or family …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the … of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional … with U.S. and international scientists to drive innovations that align with DOE's missions. …

… DAN: You’re listening to the US Department of Energy Joint … a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … Berkeley National Laboratory. Being a User Facility means that scientists from all over the world bring us big …

… of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and …

… By characterizing the structure and function of a methylthio-alkane reductase system, … ocean simply signals we’re near the beach. For bacteria, that salty, slightly stinky air is a rich source of the … they need to grow and divide. Similar to the bacterial enzymes that fix nitrogen — nitrogenases — other enzymatic …

… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree … which highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still … diversity estimates show that the gap between cultivated and uncultivated Bacteria and Archaea has steadily been …

… provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is understanding the distributed and dynamic metabolite networks of environmental microbes and how they transform their environment. …

… large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance … of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI capabilities, and also requires …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and accessibility are … Download plant, algal, fungal and microbial genomes and metagenomes — …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … in the process. If you have any questions, please contact your Project Manager or jgi-project_man[email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and …