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Natural Prodcast Episode 13: Francisco Barona Goméz
… of this is based on a really great paper that came out in 2020 where this is all explained in detail, so if you’d like … a bit embarrassed that we recorded this conversation about 10 months ago. I was pretty green at the time and had some … to my daughters– what did they think would be important in 100 years. Would natural products be important for …
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Natural Prodcast Episode 16: Marcy Balunas
… so there are– I hesitate to make a guess but maybe 50 to 100 different strains and they are in individual tubules.  … in the field, these glacial bacteria grow slow and it’s not 100% clear that we know what their biological activities … call this the needle in the Haystack. Because if we have 10,000 features which one do we look at because we are a …
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Complete Genome Sequence of the Aerobic Marine Methanotroph Methylomonas methanica MC09
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BiG-SCAPE 2.0 and BiG-SLiCE 2.0: scalable, accurate and interactive sequence clustering of metabolic gene clusters
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Genomes OnLine Database (GOLD) v.10: new features and updates
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Natural Prodcast Episode 9: Roger Linington
… Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … accurate. And so we told people that if they would curate 1000 entries, that that would earn them authorship of the … the chemical landscape of any sample set. So if you have 100 organisms, and you ferment them under one set of …
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Natural Prodcast Episode 4: Nancy Keller
… conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and … first started out the natural product community was almost 100% bacterial. Only people working in mycotoxins worked … mostly coming out of China and India, very cheap for $100-$200. But you have so many contigs. This is a problem …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… people what that number is. BETSY PARKINSON: So micromolar, 10 to the negative 6th. Nanomolar, 10 to the negative 9th. Picomolar, 10 to the negative 12th. … But what was really interesting is when I started my lab in 2018, several papers came out right in a row all about this …
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Mining Metagenomes for Cas Proteins
… UC Berkeley news release  Smallest life forms have smallest working …
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New and Improved: Eucalyptus Reference is Now Accessible
… | Genetics , with significant advances compared to the 2014 Eucalyptus grandis reference genome that has been … have relied on the E. grandis reference genome published in 2014 by a team led by University of Pretoria scientists with … genome assembly and annotation. Genome contiguity of the 2025 phased reference and 2014 diploid genome reference was …
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Sharing Structure and Function in Biological Design with SBOL 2.0
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … launched a concerted SOD defensive campaign beginning in 2000. In an effort to fingerprint the pathogen and trace its … University, was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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