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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose debris, … in  New Phytologist , researchers have pioneered new understanding of which fungi take on certain functions at … was challenging, according to Martin. “Twelve years ago, when we mapped the first sequenced RNA from the soil, only …
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A Community Resource for Secondary Metabolite Researchers
Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical … the years several secondary metabolites databases have been made available to the research community, each offering … fungal, plant, viral, and metagenome data is currently underway. … U.S. Department of Energy Joint Genome Institute …
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Spreading of Aqueous Solutions of Trisiloxanes and Conventional Surfactants over PTFE AF Coated Silicone Wafers
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees … are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next generation of …
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The Power of One, Amplified
… collecting nearly 500 single cells from a single low diversity hot spring sediment sample. Their work showed that … typically used as a complement to isolate sequencing, i.e. when the targeted cells cannot be cultivated in the lab. … a DOE Office of Science User Facility, is supported under Contract No. DE-AC02-05CH11231. This work was …
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Pinning Down a Piece of Photosynthesis
… these ocean photosynthesizers cycle carbon in changing conditions. The products of photosynthesis are easy to point … work in  Nature Communications takes on the challenge of understanding one of these proteins — and its role in … (gRNA-SeqRET) to produce knock-out mutants for experiments. When the cyanobacterium loses this protein, energy …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located … (PIs) harnessed JGI’s DNA synthesis capability to better understand a special class of compounds, or secondary metabolites, called terpenes. Terpenes are made via a tangled network of enzymes in plants. To better …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers to … JGI was one of the first things we actually started doing when starting the lab. It has been, especially from an early … What is the review process for submitted proposals?   A:  When a proposal is submitted to the JGI, JGI scientists will …
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Forming Scientific Connections and Building Community
… year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven graduate students from UC Merced … networking workshops, data carpentry hackathons, and also made new friends while working on their summer projects. …
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Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans
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Toward More Efficient Artificial Photosynthesis
… they take raw materials including sunlight, carbon and water, to convert them into energy that is then stored. A team led by researchers at the Max Planck Institute (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics …
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