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Microbial Genomics & Metagenomics (MGM) Workshop
… (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on …
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Special Initiatives & Programs
… intended to accelerate basic research in the development of cellulosic ethanol and other biofuels, advancing the federal … existing data set, or the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …
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Waiting to Respire
… of life on Earth, and led to the development of multicellular organisms. Not all bacterial lineages harnessed … Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … Facility, and research scientist Frederik Schulz in Woyke’s Single Cells group had generated and analyzed single …
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Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes
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Tapping the treasure trove of atypical phages
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Annual Genomics of Energy & Environment Meeting
… us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes …
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Emiley Eloe-Fadrosh
… to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … focus, major initiatives and more.  … BS, Biochemistry and Cell Biology, University of California, San Diego ( magna … 37:29. Bowers et al. 2017. Minimum information about a single amplified genome (MISAG) and a metagenome- assembled …
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A One-Stop Shop for Analyzing Algal Genomes
… sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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JGI-UC Merced Interns Share Their 2021 Experiences
… the Mitochondria Internship … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on …
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A Grass Model to Help Improve Giant Miscanthus
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … global RNA virome reveals diverse clades of bacteriophages. Cell 185, 4023–4037. Coclet et al., 2023. Virus diversity …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… their expertise in developing and managing public viral genomics resources such as analytical tools and data … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol …
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