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A Complex Confection Decoded: Sugarcane Reference Genome
… scale sustainable sugarcane conversion technologies for  biofuels and other bioproducts. Finally, understanding how … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and https://doi.org/10.46936/10.25585/60001194) …
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How Filamentous Fungi Sense Food
… looking to improve the industrial production of sustainable biofuels and bioproducts. Filamentous fungi are also being … tree of life, enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was …
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The fungus that made itself at home
… down plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… methane-emissions as well as efficient engineering of biofuels. Since 2010, the JGI has partnered with researchers around the world … researchers put together what they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project …
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Busting the Unbreakable Lignin
… remove lignin and transform the remaining components into  biofuels and bioproducts. If anaerobic fungi could be used … (MAO), US Army Research Office contract W911NF-19-1-0010 (MAO), National Science Foundation grant MCB-1553721 … and Michigan State University). The work (proposal: 10.46936/10.25585/60000889) conducted by the U.S. Department …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… an array of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in … can inform the efficient production of plant-based biofuels and bioproducts. ( Learn more about OGG in  this … grant 32001456 to G.C.; grant 31771687 to S.C.; grant 41571049 to Y. Wu); China Agricultural Research Systems (grant …
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Extracting the Secrets of Secondary Metabolites
… to leverage their powers in agriculture, pharmaceuticals, biofuels and beyond.  …
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Learning to Look
… use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 inovirus-like sequences compared to the 56 previously …
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Uncovering Novel Genomes from Earth’s Microbiomes
… and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) directly from sequenced …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … applied to multiple research areas including agriculture, biofuels and bioproducts, and medicine. Wading through 30 … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause diseases, and … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very … combined with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …
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A Natural Mechanism Can Turbocharge Viral Evolution
… sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is … R.C. was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program … Biological and Environmental Research (DE-SC0004632, DE-SC0010580, DE-SC0016440), and acknowledge the IsoGenie Project …
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