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Trent Northen
… large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … more.  … B.S. in Chemical Engineering, University of California Santa Barbara Ph.D. in Chemistry and Biochemistry, … is mediated by genomically divergent microorganisms. Nature Microbiology 2019 doi.org/10.1038/s41564-019-0449-y … 2023 …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered … establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a research article. Speakers will …
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Zhong Wang
… in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics … science. This is a group of computational biologists, bioinformaticians, computer scientists and biostatisticians. … Biology, Chinese Academy of Sciences, Shanghai, China BS Microbiology, Shandong University, Ji’nan, China … A …
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Frederik Schulz
… discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel … of Applied Sciences Mannheim (Germany) M.Sc. Molecular Microbiology, University of Vienna (Austria) PhD Microbial … in the era of genome-resolved metagenomics. Nature Reviews Microbiology 20: 721 Volland, J.-M. et al. 2022. A …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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JGI@25: From Life at the Extremes to Editing Genomes
Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … a Nobel Prize in Chemistry to seven. Doudna was recognized for her work on CRISPR-Cas9, technology described by the … UC Berkeley seeks other enzymes in the CRISPR-Cas system. For the past few years they have partnered with JGI’s …
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Computationally Classifying Fungal Lifestyles
… known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … Genomes Project, which aims to provide a reference genome for each of the fungal families. Researchers had access to … genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The data allowed the team to …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … that were missed using traditional approaches. This novel form of intermediate expression, when used in addition to … Metabolic engineering could lead to sustainable pathways for making high-value bioproducts including biofuels. In …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada … ecology. We also know little about where to collect the California Cone Snail  Californiconus californicus (and cone …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Yasuo Yoshikuni
… of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … His research focus includes engineering of non-model yeasts for production of biofuels and renewable chemicals, … in microorganisms from hidden corners. Nature Review Microbiology , 2022 DeMirci et al. Intersubunit Coupling …
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