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Intergenic Locations of Rice Centromeric Chromatin
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant …
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Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa … Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on … millet, grown without fertilizer and under erratic rainfall conditions. To help mitigate drought, famers are growing …
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What Happens Underground Influences Global Nutrient Cycles
… user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have … mutant library in Chlamy, as the alga is colloquially known by researchers. A missing gene from this mutant library … can regulate photosynthesis under fluctuating environmental conditions. The team aims to functionally link gene families …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Switchgrass is a native, shrubby grass that can grow year-over-year on marginal soil and … research is also informing how these grasses have adapted to a range of climates and environments. The …
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Cataloging the Microbes that Manage the Health of River Systems
United States. They also provided multiple access points to the information. The team harnessed a community-science … are key components of watershed ecosystems, where rain or snow drain into such bodies of water before heading out to … work across platforms. … This work was partially supported by awards from US Department of Energy (DOE) Office of …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When … a novel approach to better understand microbial communities by looking at protein function within them. The work was led …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … any host will do. It must be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these … program,  described in Plos Biology , the research team led by scientists at the U.S. Department of Energy Joint Genome …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the … Archaea are key players in this deep biosphere. They have adapted to acquire carbon efficiently and convert it to … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome …
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The Power of One, Amplified
… the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low … showed that single cell genomics can add significant value to the other commonly used culture-independent sequencing … a precursor to strain-level diversification and microbial speciation. … The work conducted by the U.S. Department of …
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