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Katherine Louie
… for JGI users.  Using cutting-edge mass spectrometry-based techniques, the platform delivers rich metabolite profiles … in the Green Alga Chromochloris zofingiensis. Plant Cell. 2019;31: 579–601. 5. Erbilgin O, Rübel O, Louie KB, … Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in …
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Methane Cycling Microbial Community Characteristics: Comparing Natural, Actively Extracted, Restored and Unrestored Boreal Peatlands
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). … and we continue to develop new capabilities in single-cell sequencing, spatial transcriptomics, and cell- and … year include:  A decade of work led by an international consortium culminated in a reference for the complex  sugarcane …
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Elucidating Drought-Tolerance Mechanisms in Plant Roots through 1H NMR Metabolomics in Parallel with MALDI-MS, and NanoSIMS Imaging Techniques
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A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and fungi … suggest that fungi are breaking down plant fibers, like cellulose and lignin. Bacteria, on the other hand, appear to …
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Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes
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Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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Genome-guided analysis allows the identification of novel physiological traits in Trichococcus species
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Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes
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