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Draft genome sequence of Gleimia europaea DSM 26657
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The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation
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Implications of the Plastid Genome Sequence of Typha (Typhaceae, Poales) for Understanding Genome Evolution in Poaceae
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — … of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to … proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to … or C-fern, specifically has been studied in plant research laboratories and plant biology courses across the … to S.C.; grant 41571049 to Y. Wu); China Agricultural Research Systems (grant CARS-05 to S.C.); the Key R&D …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … challenges. Viruses are everywhere — in soil, the sea and, of course, the cells of other organisms. As they … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an … called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … at Pacific Northwest National Laboratory. The team’s research at both the JGI and EMSL was enabled by the …
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The Case for Conservation
… could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the … The work wraps more than a decade of working with researchers at the U.S. Department of Energy (DOE) Joint …
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Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction▿ †
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire … picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed under the Facilities Integrating Collaborations …
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