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Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean
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Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi
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A Grass Model to Help Improve Giant Miscanthus
… The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … year (perenniality). The Impact Among the long-term aims for bioenergy feedstock crops are increasing their yields … genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from …
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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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Natural Prodcast Episode 2: The Primer, Part 2
… so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … metabolites, like sponges were a really common source for people to try to find new medicines for a long time. But we know now that most of those pathways …
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Building Sphagnum Genomic Resources
… model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … permafrost from the warming regional temperatures. For this reason, the U.S. Department of Energy is overseeing … unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The … J., Martin, J., Terry, A. et al. The DNA sequence and comparative analysis of human chromosome 5. Nature. 431, …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome … Williams and mentors Igor Grigoriev and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal … and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein …
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Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal
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Comparative genomics reveals unique wood‐decay strategies and fruiting body development in the Schizophyllaceae
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