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For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … the JGI and KBase in the heart of the Lab’s 200-acre campus—with the big move from leased space in Walnut Creek, Calif. …

JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … out and characterize uncultivated viruses. For instance, a 2018 study from a JGI-led team uncovered giant viruses in …

With a background in experimental and computational surface … focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

At JGI, he develops tools for viral discovery and analysis, with a particular fondness for RNA viruses – though he'll … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … with carbon dioxide capture and the generation of biomass, making Chlamydomonas (affectionately known as “Chlamy” … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …

… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … and archaeal cells — and detected the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then …

… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Rep. 2022 Nov 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

… into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … that methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” …

Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … areas. Additional duties of this Deputy include interacting with users seeking to exploit new genomic technologies and … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

… rhizosphere. In this episode, biologist Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of Health. The DOE works with … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …