Search

… user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The … more with JGI Microbial Program head Tanja Woyke and her Single Cells team member Frederik Schulz to screen the …

… break down the components of plant cell walls, which range from simple to complex carbohydrates, and then convert them … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …

… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  … applications. “We worked with 10 species ranging from grasses to broccoli and trees like poplar, spanning …

… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at … possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … the untapped potential waiting to be unearthed in sequencing and analyzing uncultivated microbes. Summary The …

… and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched … Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the …

… and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … available but also complementary single-cell sorting and sequencing of viruses together with their unicellular …