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Annual Genomics of Energy & Environment Meeting
Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this … talks emphasize how the research infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … has developed, tested and deployed a pipeline to first target cells from communities of uncultivated … for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … ( smc.jgi.doe.gov ) is designed with two main objectives. First and foremost, it is a BGC repository that aspires to …
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JGI-USCCN Strain Sequencing Opportunity
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The Case for Conservation
… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … The genome assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact … times the size of the next largest chromosome. As the study first author Carey put it, these sex chromosomes first …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … and high-iron homeostasis,” said Nicolas Grosjean, the first author of this paper. Grosjean is a research scientist … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Genome sequence of the palaeopolyploid soybean
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … value to the other commonly used culture-independent sequencing approaches including amplicon and metagenomic … cell genomics, where cells from environmental samples are first separated, and their genomes then amplified and …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Charpentier of the Max Planck Institute! This is the first science Nobel awarded to two women, with Charpentier … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the reference fungal  genome . … in the absence of oxygen. These findings offer the first real irrefutable proof that lignin can be …
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Metabolomics
… this identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform …
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