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… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … would best serve their quests related to processing RNA-sequencing information. According to Lawrence, this summer … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …

… viruses — to support scientists around the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — …

… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior … comparative transcriptomics. *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In …

… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the article comes out — about two months after the first draft. Woyke has so far selected the authors of these … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … aim to improve our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but … (RH-Seq). Strains of S. cerevisiae and S. paradoxus were first used to create a sterile interspecific hybrid. In this …

… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how research infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new … Hungate , of Northern Arizona University, delivered the first keynote address of the 2023 JGI Annual Meeting. As the …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … the same place they often source their nutrients — the shii tree, a Japanese relative of the oak. These fungi are part … at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and assembling …

… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. …

… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … roles in carbon and other nutrient cycles. “This is the first study to take a more global look at giant viruses by … available but also complementary single-cell sorting and sequencing of viruses together with their unicellular …