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Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …

… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be spotted … and refined the algorithm, the search tool combed through more than 70,000 microbial and metagenome datasets, … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels … into biological diversity. You don’t have tunnel vision anymore, only seeing the microbes you can grow in the lab — … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers … users — 2,475 — had active proposals with us, along with more than 15,000 secondary users who made use of our data. … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …

JGI’s plant portal Phytozome . Although the Data Portal is currently only accessible via Phytozome, the improvements it encompasses are more broadly applicable to the download processes from the … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… of a lichen fungus and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of … Their partnership is widespread and cosmopolitan: more than 20,000 ascomycete species and hundreds of microalgae …

… and minor capsid proteins (MCP and mCP, respectively), ATPase involved in DNA packaging, and PRO, a cysteine … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” (based on … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… the call recommended including plans to analyze and distribute data through the  DOE Systems Knowledgebase … Genome Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …

… crassa, and to identify and decide on the order in which this fungus breaks down plant cell wall materials including … cell-wall degrading enzymes (PCWDEs) that allow them to efficiently break down the wide array of simple and complex … carbohydrates, and then convert them into simple sugars. More importantly, when faced with a veritable buffet of …

With a new methodology, scientists are now getting more complete genomic results from single cells. The Science … Shotgun metagenomic sequencing takes much less time than its single-cell counterpart. In this approach, DNA from …

… by a virus so that it no longer looks or quacks like one, is it still a duck? For a team led by researchers from The … bacteria’s central carbon and energy metabolism, to obtain more nutrients from the environment. Demonstrating that the … on the ecosystems can vary is a step toward developing more efficient predictive ecosystems models. Next, the …

… that have high productivity across a range of environments is becoming increasingly important for food, fuel and other … and are exploring improvements to switchgrass through more targeted genome editing techniques to customize the … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …