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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … a gene sequence-based predictor of gene expression levels using machine learning tools. “This was very exciting to see …
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Fungal diversity and function in metagenomes sequenced from extreme environments
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … laboratory and computational technologies at scale, improving connectivity across the DOE data ecosystem, … of individual organisms or environmental DNA, and then using advanced capabilities to understand their inner …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … User Facility, and others like it, are uncovering the true diversity of the fungal kingdom. The abundance of fungal … of specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both …
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a … novel technique to access high-quality genomic information using minute quantities of DNA derived from individual … a way for researchers to study the planet’s microbial diversity, much of which remains unknown and uncultured in …
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Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria
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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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Evaluation of inducible promoter–riboswitch constructs for heterologous protein expression in the cyanobacterial species Anabaena sp. PCC 7120
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iPHoP: A Matchmaker for Phages and their Hosts
With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … of virus-host interactions opens the possibility of using phages to engineer microbial communities. One day, … predictions. This information could open the door to improving crop yields and a better understanding of the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … your website that-- speaking of hormones, that you're also using hormones as this chemical communication signal. BETSY …
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