Results

2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the … of cellular complexity, the tree of life, cultivation of new lineages and the function of candidate lineages in … Project Coordination Rekha Seshadri, Functional Annotation Group Natalia Ivanova , Functional Annotation Lead Steven …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new … metagenome binning software … Education … Selected Publications … Software …
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Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy
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Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
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Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages
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Learning to Look
… a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth … water, and humans—around the world. By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the … CRISPR-Cas systems, and led the researchers to predict the presence of anti-CRISPRs, recently discovered inhibitors of …
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Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park
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Novel Hydrophobins from Trichoderma Define a New Hydrophobin Subclass: Protein Properties, Evolution, Regulation and Processing
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DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus
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Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions
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Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… not just crops, animals and humans, but also microbes whose presence or absence can impact the planet’s nutrient cycles. … from JGI’s Nikos Kyrpides that his Microbiome Data Science group was also working on RNA virus mining. After a couple … higher-level classifications of virus groups (phyla.) The new sequences are filling in some gaps on existing virus …
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