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Juergen Polle
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Fungal Friends or Foes in Plant Roots
… 84 gene families that were common in fungi that live within plants (endophytes). These include genes that degrade … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by … the Plant–Microbe Interfaces Scientific Focus Area in the Genomic Science Program, the Office of Biological and …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … Quake’s team at Yellowstone National Park’s Obsidian Pool hot spring. The researchers applied mini-metagenomics to these samples by sorting the microbes into small …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals … intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels … the University of Pretoria and colleagues aim to unlock the genomic diversity within the eucalypts, a group of …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, O’Malley and … standards.  A year later, her team used proteomics, genomics and transcriptomics to discover another advantage …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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Tomas Tyml
… traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our …
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Cataloging the Microbes that Manage the Health of River Systems
… also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at … Science Program and the University of Colorado Anschutz’s Genomics Shared Resource. The work (proposal … under contract no. DE-AC02-05CH11231. Work conducted at the Genomics Shared Resource at the University of Colorado was …
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Implications of the Plastid Genome Sequence of Typha (Typhaceae, Poales) for Understanding Genome Evolution in Poaceae
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  … usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … this tool establishes the JGI as a leader in single-cell genomic amplification at a large scale. Summary The two most …
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