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Matt Blow
… R&D for production and user science. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge … as a research scientist on projects to develop functional genomic technologies and to understand genome function in … and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training …
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Boosting Small Molecule Production in Super “Soup”
… Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … of cell growth by isolating the soluble components of lysed cells. By separating the production of enzymes (during … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety … methanogens were, but they were discovered by genome sequencing, which is a much less biased approach to studying …
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Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence
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Patterns of genomic variation reveal a single evolutionary origin of the wild allotetraploid Mimulus sookensis
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Small cells with big secrets
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Tanja Woyke Elected to American Academy of Microbiology
… Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in … Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells … One example, published in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … “Now with these new tools — metatranscriptomics, RNA sequencing of soil RNA — we can access — ‘What are they …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … 1.5 megabases (MB) of a synthesis, compared to 0.5 MB for a single lab.  Q:  What is the review process for submitted …
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