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… Virophages are small viruses with double-stranded DNA … 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  Further analysis led to the … at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …

… JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s more to … Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the … move toward characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal …

… a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 … correct sequence to snip — but not all guides are effective. To ensure the gene editing tool will make the right cut, … researchers created a set of guide RNAs that were effective against 94 percent of the genes in a lipid-prolific …

… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to identify a … are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The … DNA sequence and biology of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 Schmutz, J., …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … the genome of the common bean. That work was published online June 8, 2014 in the journal Nature Genetics . “Common beans are a … P. vulgaris on Phytozome …

… Trained on environmental data, a new JGI tool more accurately facilitates … methodologies developed for natural languages to study genomes,” Wang explained.  And since microbial genomes are … which it is available. Wang estimated that there are 500-800 genome foundation models available on the platform.  ”We …

… heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. Together, these teams provide analysis support and R&D for production and user … to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project …