Search

… Roux , Susannah Tringe , and Tanja Woyke  were part of a “big data” mining effort reported in  Nature Biotechnology … comparison of 135 fungal sequenced genomes to understand how plants and fungi developed symbiotic relationships, and … sequence and genomic toolkit for the perennial grass  Miscanthus sinensis in  Nature Communications.  The reference …

… pectin and hemicellulose. While these two polysaccharides can yield sugar monomers, it’s only with the aid of … down polysaccharides. But scientists have wondered exactly how the microbial community carries out its helpful … in the bee’s ileum, a structure analogous to the human small intestine; and  Bifidobacterium,  which dwells …

… and Duke University, published their research related to how bacteria that colonize the roots of sphagnum work to … moss may hold clues to how these carbon sink environments can continue to hold onto their carbon despite global … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …

… DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the … Neurohub Investigator 2020   Elected Fellow of the American Association for the Advancement of Science (AAAS) 2020- …

… The alga naturally produces high amounts of oil and can grow with or without light. The relatively small size of its genome also simplifies metabolic modeling … Scientists have already used this alga to understand how genes with unusual structures work in green algae. The …

… and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with … being used and cycled in different environments. It also shows how environmental conditions may affect metabolic … together. Those similarities, based on their ratios of small DNA sequence fragments called tetranucleotides, are a …

… Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for … galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find …

… data sharing to accelerate discovery and maximize the benefit to society. Inspired by the Human Genome Project … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 … current data policies for gaining a better understanding of how changes may affect data-producing users and other users. …

… Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Protein Families (NMPF) Catalog . Published in the October issue of Nature, the study highlights the vast …

… Interns contributed to a number of projects, from refining lab protocols at the bench to … Jonelle Basso, Heejung Cho Project:  Characterizing how resident phages shape their host phenotype Graduate interns Adeola …

… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary … driven by code, without putting humans in the loop. He is a big proponent of empowering people and transparency and a …

… this episode, hear two interns from the 2021 cohort describe their deep dives into genomics, computational tools, and big data.  …