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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … BioMart data warehouse interfaces they have come to rely on from Phytozome, with a more intuitive interface, deployed on …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … break down the components of plant cell walls, which range from simple to complex carbohydrates, and then convert them … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … Joint Genome Institute, Dr. Kyrpides led the development of the genome analysis and Bioinformatics core at Integrated …
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From Textbook to Real World Applications
… When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in the …
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Automated annotation of scientific texts for ML-based keyphrase extraction and validation
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Genome Sequence of Victivallis vadensis ATCC BAA-548, an Anaerobic Bacterium from the Phylum Lentisphaerae, Isolated from the Human Gastrointestinal Tract
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Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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A comparative genomics study of 23 Aspergillus species from section Flavi
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