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Doubling Down on Known Protein Families
… that single beam. When it comes to microbial communities, scientists have historically been unable to see beyond the … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … diversity has doubled, but in reality it could be three or four or five or tenfold more out there.” Digging Further into …
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Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle
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The Power of One, Amplified
… single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting … genomes then amplified and sequenced individually, offering scientists the opportunity to apply population genomics … microbial populations. The work appeared in The ISME Journal . Members of the Dunfield lab collected samples from …
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … Editorial board member of Synthetic Biology (Oxford Journal) Review committee member of International Journal of …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National … in developing and managing public viral genomics resources such as analytical tools and data repositories to two …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program , which …
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Learning to Look
July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a … result of this hidden diversity of inoviruses now overhauls our perception of this virus group – from minor curiosities …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …
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Scientific Advisory Committee
Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … programs at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says … select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Help from Citrus’ Bitter, Hardier Cousin
… citrus, trifoliate orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now … a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to their User Executive … and education communities access and build on the JGI’s resources. The UEC represents the JGI user community and is … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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