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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into … of prokaryotes and can form roughly 300 combinations of metabolites. To demonstrate the potential utility of the …
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A One-Stop Shop for Analyzing Algal Genomes
… to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one … They play key roles in global carbon cycling, are sources of natural products, and have potential as biofuel … Knowledgebase (KBase) also allows researchers to study how metabolites flow through and transform in algae. PhycoCosm …
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Sulfur metabolites that facilitate oceanic phytoplankton–bacteria carbon flux
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The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite
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Metabolite release by nitrifiers facilitates metabolic interactions in the ocean
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A Plant Root Atlas for Tracking Developmental Trajectories
… datasets. The work was  recently published in the journal  Developmental Cell and provides a community resource … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  …
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Training the Next Generation of Talent
… of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus … a part of the students’ thesis,” she says. “Second, we want our students to gain the opportunity to see what research is … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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Katherine Louie
… biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen … Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and Chemical Engineering.  DOI: …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards … mission areas across the 6 Office of Science research programs. Among the recipients of the latest SCGSR award is … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… collaboration is available for licensing. The Science In  Nature Communications , researchers describe a … efforts align with BER missions to provide the fundamental science to support innovations for bioproduction and advance … separating urine from other waste streams and recovering resources that could be used for products such as agricultural …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… swapped for the heavier, non-radioactive isotope Carbon-13, researchers can then safely follow the path of that … process. The isotope labeling incubations can take hours to months, followed by weeks of tricky, laborious lab … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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