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Fungus Fuels Tree Growth
… growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … (Sunny) Liao of the University of Florida collected forest samples of poplar and soil from Washington and Oregon. The … as secreted proteins. However,  M. elongata  seems to encourage the plant to have leakier cell walls and weaker …
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Kjiersten Fagnan
… the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. Fagnan … National Microbiome Data Collaborative: enabling microbiome science. Nat Rev Microbiol 18, 313–314 (2020). … participant, 2021 Member of the Networking and Information Technology Research and Development (NITRD) Program Chair of …
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JGI Interns at UC Merced Earn CAMP Merit Awards
DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC … (NSF) and supports underrepresented minorities in science, technology, engineering and math (STEM) fields. At the 2016 … Mentor: Dr. Arnold Kim)   “It is a beautiful thing, that our young campus earned 25% of the research awards,” said …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to … class at Florida’s Boca Raton Community High School. The course had a defined set of objectives, and started with an … Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards … mission areas across the 6 Office of Science research programs. Among the recipients of the latest SCGSR award is … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to …
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Fishing for Novel Cellulose Degraders
… hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly … enzyme activity assay. The work was  reported in  The ISME Journal . While the screen caught several microbes from known … contract DE-FC02-07ER64494. EG is supported by the NIGMS Biotechnology Training Program (NIH 5 T32 GM008349) at the …
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John Vogel
… driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … (e.g. sequenced mutant collections, transformation technology, epigenetic analysis techniques) and utilizing …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the …
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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The core metabolome and root exudation dynamics of three phylogenetically distinct plant species
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