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Uncovering the dominant role of root metabolism in shaping rhizosphere metabolome under drought in tropical rainforest plants
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … goal of producing sustainable fuels from alternative sources. Moreover, the team says the approach they used to …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … of their well-designed sampling and analysis of their data at the time. Following the publication of their paper … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … metabolites are useful in a variety of fields including biotechnology, medicine and agriculture. This comprehensive …
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Identifying genomic data use with the Data Citation Explorer
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A Natural Mechanism Can Turbocharge Viral Evolution
… allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus … has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only … under contract no. DE-AC02-05CH11231. This research used resources of the National Energy Research Scientific Computing …
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Enlarging Windows into Understanding Gene Functions
… of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint … as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the …
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A multi-omic survey of black cottonwood tissues highlights coordinated transcriptomic and metabolomic mechanisms for plant adaptation to phosphorus deficiency
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Elucidating Drought-Tolerance Mechanisms in Plant Roots through 1H NMR Metabolomics in Parallel with MALDI-MS, and NanoSIMS Imaging Techniques
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John Vogel
… driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … (e.g. sequenced mutant collections, transformation technology, epigenetic analysis techniques) and utilizing …
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Ray Turner Completes Last Tour of Lab Duty at JGI
Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory Counsel) and … in his event remarks. “I feel that is something crucial to our success, and Ray has been that. That person needs … to the ever-shifting landscape of funding Federal for programs, noted that “Ray is someone who just will get it …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and … DOE User Facility: Learn About Available Expertise and Resources, Open-Call Opportunities, and Important Tips for … Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm …
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