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… asked and whether they are within DOE mission areas of bioenergy, carbon cycling, and biogeochemistry. This is a … For model fungi, not sequenced by JGI and adopted by large research community we  are trying to link to the community … the Browse page tool to compare your own data with the JGI database? A: You can use custom tracks menu item to load …

… carbon metabolism in a Chlamydomonas reinhardtii starchless mutant. The Plant Cell . 25: 11, 4305-4323. 2013 Blaby et. … UCLA Molecular Biology Institute Postdoctoral Award for Research Excellence …

… that pushed instrument run information directly into the database rather than depending upon error prone, manual …

… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most … bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of with more than 8,300 …

… that will help shape all of our futures.” Proposing a Research Experience Benskin wanted to give his high school juniors a research project experience and one of his email inquiries, … samples from multiple locations. Back in the classroom, JGI researchers walked students through the processes of DNA …

… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the discovery of miniature Clustered … showcase of the unique capabilities provided from the IMG/M database in enabling new discoveries and is a continuation …

… also paved the way for a longstanding collaboration between researchers at the JGI and the French National Institute for … Genome Inside: THE Bioenergy Tree …

… the CRISPR-Cas9 investigations began as “curiosity driven research.” In the early 2000s, UC Berkeley colleague and … to address a wide range of new questions — from basic research, like learning how to optimize the gene editing … them in plants other than maize including black cottonwood, rice,  Arabidopsis ,  Mimulus and Amborella (in …

… the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) … alkane-oxidizing archaea. They used IMG because the database already contains metagenome datasets from a variety … known methanogens. With the help of this information, the researchers found evolutionary relationships between …

… by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …

… As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the … to the overreliance on a few species like Arabidopsis or rice as homology models for computational function … to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as …

… specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. Department of … potential applications to industrial processes. Summary JGI researchers developed a function-driven, single-cell screen … several microbes from known cellulose-degrading groups, the researchers also hooked and were able to reconstruct a …