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Rapid Evolution of Coral Proteins Responsible for Interaction with the Environment
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Trichoderma harzianum transcriptome in response to the nematode Pratylenchus brachyurus
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Pangenomes suggest ecological-evolutionary responses to experimental soil warming.
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, … Of course. Fungi have a larger genome. The genetics was slower to begin with. So transformation, or manipulation of …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … capability to store and accurately display eukaryotic and viral BGC sequences. Expansion of the SMC to include fungal, …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which … of environments, including plants, soil, and the gut. To better understand the dynamics of this molecule, … light when bound to a molecule of interest, such sensors allow researchers to easily detect and measure their target …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … and microbes with Mohammad Alanjary and Tilmann Weber to be a really valuable piece that shaped my thoughts about … it from an evolutionary standpoint where I really could follow evolution. And I could see a certain time span within …
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Frederik Schulz
… Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find novel functions that may impact microbiome structure … user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product … a strong core foundation of robust mass spectrometry workflows for polar and nonpolar metabolite analysis, creation of …
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Understanding Wildfire Recovery, Starting in Soil
… and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes within the soil. … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By … They sampled soil across a variety of conditions: unburned, low, moderate and high-burn severity sites. From those …
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Environmentally responsive QTL controlling surface wax load in switchgrass
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Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing
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