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Picking Up Threads of Cotton Genomics
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the HudsonAlpha Institute for …
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Ancient Algae Reveal Secrets of Plant Evolution
… a strong bioeconomy. Summary Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … This work was funded by the US …
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Igor Grigoriev
… industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome Institute, a Senior … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in soil microbiome …
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Virus-Microbe Interactions of Mud Island Mangroves
… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program , which awards graduate students the opportunity to … and saw great potential in the academic and industry collaborations taking place. I am planning to enter the …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … with statistical significance. Nat Commun. 13, 2510 (2022). https://doi.org/10.1038/s41467-022-30118-9 Swift CL, …
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Green Algae Reveal One mRNA Encodes Many Proteins
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The work was partly enabled by the “Facilities Integrating Collaborations for User Science” (FICUS) collaborative science initiative between the JGI and EMSL.  … The U.S. Department of Energy Joint Genome …
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Understanding Wildfire Recovery, Starting in Soil
… and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the JGI and EMSL was enabled by the Facilities Integrating Collaborations for User Science (FICUS) initiative . In this program, researchers leverage the capabilities of more than …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks … research was enabled in part by the  Facilities Integrating Collaborations for User Science (FICUS) collaborative … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 … This work also received support from the Genomic Science Program in the U.S. Department of Energy, Office of Science, …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early Career Research … 2021, which aims in part to build off of this work. Former JGI postdoctoral scholar Margot Bezrutczyk collaborated …
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Nikos Kyrpides
Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis … with geNomad. Nat Biotechnol . Epub. Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse … Laboratory Outstanding Scientific Achievement Award (2022) ASM’s USFCC/J. Roger Porter Award (2018) Honorary …
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