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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … structures is obviously very valuable. From my perspective, JGI has a large database of biosynthetic gene clusters and …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published … Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Metagenome Program
… technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated … truncatula and an arbuscular mycorrhizae, Rhizophagus irregularis using single-cell and spatial ‘omics … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change … ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 water samples. Genomic DNA … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to … staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as representatives highlighted …
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze …
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Dan Rokhsar
DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the … Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, Computational Biology, …
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