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Pangenome analysis of Liriodendron reveals presence/absence variations associated with growth traits
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The More the Merrier: Making the Case for Plant Pan-genomes
… merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … B. distachyon , a relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of letters A, T, C and G … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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The JGI announces 2024 awardees for our Community Science Program annual call
… Corales, Hugh Cross, Megan DeMarche, Joanne Emerson, Matthew Hudson, Megan Keller and Julia Kelliher; [below] … Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the fifteen scientists selected … CSP proposals this year,” noted Tanja Woyke, who heads JGI’s User Programs. “These PIs have proposed research that …
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Serendipita Fungi Modulate the Switchgrass Root Transcriptome to Circumvent Host Defenses and Establish a Symbiotic Relationship.
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Comparative transcriptomics and metabolomics reveal specialized metabolite drought stress responses in switchgrass (Panicum virgatum)
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal … represents? A: Some information is available in Help pages. 25.  Annotation tracks such as CAZymes, Peptidases, TF, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of … been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental challenges. Through innovative research in synthetic biology, the program enables the …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network … Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory … webinar complements a  recent webinar co-hosted by the JGI and EMSL inviting researchers to apply for a FICUS …
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Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations
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The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
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Genetic architecture of floral traits in bee‐ and hummingbird‐pollinated sister species of Aquilegia (columbine)
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